Outline. SW-FCCS Single Wavelength Excitation Fluorescence Cross-correlation Spectroscopy. Confocal FCS setup

Outline • • • • • • • Single Wavelength Fluorescence Cross-Correlation Spectroscopy (SW-FCCS) for the quantitative investigation of biomolecular inte...
Author: Jack Webb
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Outline • • • • • • •

Single Wavelength Fluorescence Cross-Correlation Spectroscopy (SW-FCCS) for the quantitative investigation of biomolecular interactions in vivo

Thorsten Wohland, Ling Chin Hwang, Ping Liu, Xianke Shi, Yong Hwee Foo, Thankiah Sudhaharan, Shang Wei Chong, Vladimir Korzh, Sohail Ahmed, Ichiro N. Maruyama

Fluorescence Cross-correlation Spectroscopy (FCCS)

Fluorescence Cross-correlation Spectroscopy (FCCS) Single wavelength FCCS (SW-FCCS) SW-FCCS with 2 and 3 colors Dimerization of the Epidermal Growth Factor Receptor (EGFR) Kd measurements in zebrafish embryos (Cdc42, IQGAP1) How fluorescence are fluorescent proteins? Imaging Total Internal Reflection FCS

SW-FCCS Single Wavelength Excitation Fluorescence Cross-correlation Spectroscopy

2.2 2.0

G(τ)

1.8 1.6 1.4 1.2 1.0 10

-6

10

-5

10

10

-6

10

-4

10 τ[s]

-3

10

-2

10

-5

10

-1

10

-4

10 τ[s]

-3

10

-2

10

0

-1

10

2.2 2.0

G(τ)

1.8 1.6 1.4 1.2 1.0 0

Ricka and Binkert, Phys Rev A, 39(5) :2646-52 (1989) Hwang and Wohland, ChemPhysChem 5, 549-551 (2004)

Confocal FCS setup FCS/FCCS measurements can be performed with self-built addition to commercial confocal microscope

Pan et.al. Rev. Sci. Instr. (78): 053711 (2007)

4 Hwang and Wohland, JCP, 122, 114708 (2005)

The Stokes’ shift problem Quantum Dots

Tandem Dyes

Measurements can be performed with one- or two-photon excitation.

Quantum dots and tandem dyes both have very large Stokes’ shifts allowing the simultaneous excitation with fluorescein at 488 nm but separate detection.

FCCS taken on a normal FV300 confocal microscope

FCS microscope performance Diffusion time profile

DC-FCCS: Biotin-Alexa488 (Ex: 488, Em 520) Streptavidin-Cy5 (Ex: 633, Em 670)

0

0

5.2e-05

4

5.4e-05

1.25

G(τ)

G(τ)

5

5e-05

1.15

1.02

6

8

5

7

10

224

224

112

168

1.00

1.00

5

4.8e-05 5.6e-05

6

168

56

1.04

1.05

4.6e-05

0

[SACy5]:[BA488] Positive Binding 1:0.2 1:0.4 1:0.6 1:0.8 1:1 1:1 Negative Binding

1.06

1.10

5.2e-05

5.2e-05 6e-05

168

112

1.08

[SAQR]:[BA488] Positive Binding 1:0.2 1:0.4 1:0.6 1:0.8 1:1 1:1 Negative Binding

1.30

1.20

5.4e-05

112

5 5

56

5e-05

56

SW-FCCS: Biotin-Alexa488 (Ex: 488, Em 520) Streptavidin-Quantum Red (Ex: 488, Em 670)

Structure parameter profile

0

224

56

112

168

-6

10

-5

-4

-3

10

10

10

τ(s)

-2

10

-1

10

0

10

-6

10

-5

10

-4

10

-3

-2

10

τ(s)

-1

10

224

10

0

8

Binding of biotin-fluorescein to Quantum Red-streptavidin

Streptavidin – Biotin-Fluorescein

[QR] = 5 nM QR

Laser Power: 20 μW

BF

[BF]>4[QR]

[QR]

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