Chemistry I (Organic): Stereochemistry

Chemistry I (Organic): Stereochemistry Hybridisation and Molecular Shape: Enantiomers Dr Alan Spivey; Office: 834 C1; e-mail: [email protected]...
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Chemistry I (Organic): Stereochemistry Hybridisation and Molecular Shape: Enantiomers Dr Alan Spivey; Office: 834 C1; e-mail: [email protected]; Tel.: 45841 A Qualitative Guide to Hybridisation of Carbon: Carbon (group 4 of periodic table) – 4 valence electrons atomic structure: 1s2 2s2 2p2 (4 × atomic orbitals) x

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Sp3 hybridised: tetrahedral (4 × hybrid orbitals) x

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Sp2 hybridised: trigonal planar (3 × hybrid orbitals and 1 × atomic orbital) x

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Sp hybridised: linear (2 × hybrid orbitals and 2 × atomic orbitals) x

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Nomenclature of Stereochemistry: Stereochemistry deals with the way that chemistry is affected by differing orientations of the same groups in space. Stereoisomers are isomers whose atoms are connected in the same order (contrast structural isomers), but their spatial arrangement differs. Stereoisomers are of two kinds – enantiomers (this lecture) and diastereomers (lecture 3). Enantiomers: Definitions: 1) Enantiomers are stereoisomers that are non-superimposable mirror images. 2) Enantiomers are stereoisomers lacking any improper rotation axes (see ‘symmetry workshop’). Molecules related as non-superimposable mirror images (i.e. enantiomers) are said to be chiral. A common, but not obligatory, feature of enantiomers is that they contain a chiral/stereogenic centre. e.g. a carbon atom with four different groups attached. Such molecules are asymmetric and have only a Cn (n = 1, i.e. C1) proper rotation axis.

Dissymmetric molecules, which have C1 and Cn (n = integer > 1) proper rotation axes only, are also chiral.

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Some chiral molecules with a single chiral/stereogenic centre asymmetric molecules (C1) OH Me

Cl Si Me Et Ph

H Ph

Et N Me CH Ph Ph 2

BF4

O N Me CH Ph Ph 2

BF4 Et P Me CH Ph Ph 2

Et S Me Ph

BF4

O P Me CH Ph Ph 2

O P Me CH Ph Ph 2

O S Me Ph

O S Me Ph

Et Me N Ph

N Me Et Ph

Ph Ph

#

Me

Et N Ph

H2N NH2 H2 NH2 N Co N H2 NH

Cl N

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NB. Structures boxed in red are configurationally labile at an appropriate temperature. They all have a lone pair of electrons as one ' substituent'off the tetrahedral centre. Lone pairs are able to ' tunnel'through the central atom; this results in an inversion of configuration of the molecule (i.e. the enantiomers can interconvert, as shown explicitly for the tert-amine case above). The temperature/rate at which this happens depends on the central atom and the other substituents present. For example, most tert-amines rapidly interconvert their configuration at room temperature but the aziridine shown bottom left can be separated into its enantiomers at this temperature.

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Some chiral molecules without a chiral/stereogenic centre asymmetric molecules (C1)

H Me

Me C

Me

H Me

H

Me

Ph

H Me

H

Cl

Me

O2N NO2

Me Me CO2H

Fe

N

Me

Ph

Me

dissymmetric molecules (Cn) Me

H Me

N H

Ph

H

N Me

Me Ph

NB. As on the previous page, structures boxed in red are configurationally labile at an appropriate temperature. In these cases, interconversion between enantiomers results when the steric barriers to rotation about certain single bonds becomes energetically possible. In all other cases interconversion between enantiomers requires breaking and reformation of either σ (sigma) bonds or π (pi) bonds. The high energy required to do this is not generally available thermally.

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Enantiomers have identical chemical and physical properties, except insofar as they rotate the plane of polarised light equally, but in the opposite directions, e.g. NH3 H O2C

NH3

Me

Me

H CO2

(-)-alanine [α α]D = - 8.5°

(+)-alanine [α α]D = + 8.5°

The rotation of the plane of polarised light is measured using a polarimeter:

Compounds which rotate the plane of polarised light clockwise are called (+)-isomers, or dextrotatory (d). Conversely, those that rotate the plane anticlockwise are called (-)-isomers or laevorotatory (l). The separation of mirror image molecules is called resolution. Because enantiomers have the same chemical properties, resolution of enantiomers can be difficult. The first recorded resolution carried out by humans is that of Louis Pasteur in 1848. *****

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